Iverson Lab Publications
2024
Singh
Prashant K ,
Sharma
Pankaj ,
Afanzar
Oshri ,
Goldfarb
Margo H ,
Maklashina
Elena ,
Eisenbach
Michael ,
Cecchini
Gary ,
Iverson
T. M. ,
CryoEM structures reveal how the bacterial flagellum rotates and switches direction
Nature Microbioligy.
2024 Apr
17;
Sharma
Pankaj ,
Maklashina
Elena ,
Voehler
Markus ,
Balintova
Sona ,
Dvorakova
Sarka ,
Kraus
Michal ,
Vanova
Katerina Hadrava ,
Nahacka
Zuzana ,
Zobalova
Renata ,
Boukalova
Stepana ,
Cunatova
Kristyna ,
Mracek
Tomas ,
Ghayee
Hans K. ,
Pacak
Karel ,
Rohlena
Jakub ,
Neuzil
Jiri ,
Cecchini
Gary ,
Iverson
T. M. ,
Disordered-to-ordered transitions in assembly factors allow the complex II catalytic subunit to switch binding partners
Nature Communications.
2024 Jan
11;
2023
Iverson
T. M. ,
Singh
P. K. ,
Cecchini
G ,
An evolving view of complex II—noncanonical complexes, megacomplexes, respiration, signaling, and beyond
Journal of Biological Chemistry.
2023 Jun
1;
299
(6).
104761
- PMID: 37119852 [PubMed].
- PMCID: PMC10238741.
Singh
P. K. ,
Cecchini
G ,
Nakagawa
T ,
Iverson
T. M. ,
CryoEM structure of a post-assembly MS-ring reveals plasticity in stoichiometry and conformation
PloS one.
2023 May
19;
18
(5).
e0285343
- PMID: 37205674 [PubMed].
- PMCID: PMC10198558.
Dulin
Callie C ,
Sharma
Pankaj ,
Frigo
Laura ,
Voehler
Markus W ,
Iverson
T. M. ,
EvdS6 is a bifunctional decarboxylase from the everninomicin gene cluster
Journal of Biological Chemistry.
2023 Jun
5;
Tomar
Rachana ,
Minko
Irina G ,
Sharma
Pankaj ,
Kellum
Andrew H ,
Lei
Li ,
Harp
Joel M ,
Iverson
T. M. ,
Lloyd
R Stephen ,
Egli
Martin ,
Stone
Michael P ,
Base excision repair of the N-(2-deoxy-d-erythro-pentofuranosyl)-urea lesion by the hNEIL1 glycosylase
Nucleic Acids Research.
2023 May
8;
2022
Maklashina
Elena ,
Iverson
Tina M ,
Cecchini
Gary ,
How an assembly factor enhances covalent FAD attachment to the flavoprotein subunit of complex II
Journal of Biological Chemistry.
2022 Sep
8;
Perry-Hauser
Nicole A ,
Kaoud
Tamer S ,
Stoy
Henriette ,
Zhan
Xuanzhi ,
Chen
Qiuyan ,
Dalby
Kevin N ,
Iverson
Tina M. ,
Gurevich
Vsevolod V ,
Gurevich
Eugenia V ,
Short Arrestin-3-Derived Peptides Activate JNK3 in Cells
International Journal of Molecular Sciences.
2022 Aug
4;
Bensing
Barbara A. ,
Stubbs
Haley E. ,
Agarwal
Rupesh ,
Yamakawa
Izumi ,
Luong
Kelvin ,
Solakyildirim
Kemal ,
Yu
Hai ,
Hadadianpour
Azadeh ,
Castro
Manuel A. ,
Fialkowski
Kevin P. ,
Morrison
KeAndreya M. ,
Wawrzak
Zdzislaw ,
Chen
Xi ,
Lebrilla
Carlito B. ,
Baudry
Jerome ,
Smith
Jeremy C. ,
Sullam
Paul M. ,
Iverson
T. M. ,
Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation
Nature Communications.
2022 May
18;
Perry-Hauser
Nicole A. ,
Hopkins
Jesse B ,
Zhuo
Ya ,
Zheng
Chen ,
Perez
Ivette ,
Shultz
Kathryn M ,
Vishnivetskiy
Sergey A ,
Kaya
Ali I ,
Sharma
Pankaj ,
Dalby
Kevin N ,
Chung
Ka Young ,
Klug
Candice S. ,
Gurevich
Vsevolod V ,
Iverson
T. M. ,
The Two Non-Visual Arrestins Engage ERK2 Differently
Journal of Molecular Biology.
2022 Jan
22;
Perez
I. ,
Berndt
S. ,
Agarwald
R. ,
Castro
M. A. ,
Vishnivetskiy
S. A. ,
Smith
J. C. ,
Sanders
C. R. ,
Gurevich
V. V. ,
Iverson
T. M. ,
A Model for the Signal Initiation Complex Between Arrestin-3 and the Src Family Kinase Fgr
Journal of Molecular Biology.
2022 Jan
30;
434
(2).
- PMID: 34902430 [PubMed].
2021
Qu
Changxiu ,
Park
Ji Young ,
Yun
Min Woo ,
He
Qing-tao ,
Yang
Fan ,
Kim
Kiae ,
Ham
Donghee ,
Li
Rui-rui ,
Iverson
T. M. ,
Gurevich
Vsevolod V. ,
Sun
Jin-Peng ,
Chung
Ka Young ,
Scaffolding mechanism of arrestin-2 in the cRaf/MEK1/ERK signaling cascade
Proceedings of the National Academy of Sciences.
2021 Sep
10;
Nason
Rebecca ,
Büll
Christian ,
Konstantinidi
Andriana ,
Sun
Lingbo ,
Ye
Zilu ,
Halim
Adnan ,
Du
Wenjuan ,
Sørensen
Daniel M. ,
Durbesson
Fabien ,
Furukawa
Sanae ,
Mandel
Ulla ,
Joshi
Hiren J. ,
Dworkin
Leo Alexander ,
Hansen
Lars ,
David
Leonor ,
Iverson
T. M. ,
Bensing
Barbara A. ,
Sullam
Paul M. ,
Varki
Ajit ,
Vries
Erik de ,
Haan
Cornelis A. M. de ,
Vincentelli
Renaud ,
Henrissat
Bernard ,
Vakhrushev
Sergey Y. ,
Clausen
Henrik ,
Narimatsu
Yoshiki ,
Display of the human mucinome with defined O-glycans by gene engineered cells
Nature Communications.
2021 Jul
1;
Brown
Breann L. ,
Iverson
T. M. ,
Handling heme with care
Nature Chemical Biology.
2021 Jun
8;
Chen
Q. ,
Zhuo
Y. ,
Sharma
P. ,
Perez
I. ,
Francis
D. J. ,
Chakravarthy
S. ,
Vishnivetskiy
S. A. ,
Berndt
S. ,
Hanson
S. M. ,
Zhan
X. ,
Brooks
E. K. ,
Altenbach
C. ,
Hubbell
W. L. ,
Klug
C. S. ,
Iverson
T. M. ,
Gurevich
V. V. ,
An Eight Amino Acid Segment Controls Oligomerization and Preferred Conformation of the two Non-visual Arrestins
Journal of Molecular Biology.
2021 Feb
19;
433
(4).
- PMID: 33387531 [PubMed].
- PMCID: PMC7870585.
2020
Limbrick
Emilianne M. ,
Graf
Michael ,
Derewacz
Dagmara K. ,
Nguyen
Fabian ,
Spraggins
Jeffrey M. ,
Wieland
Maximiliane ,
Ynigez-Gutierrez
Audrey E. ,
Reisman
Benjamin J. ,
Zinshteyn
Boris ,
McCulloch
Kathryn M. ,
Iverson
T. M. ,
Green
Rachel ,
Wilson
Daniel N. ,
Bachmann
Brian O. ,
Bifunctional Nitrone-Conjugated Secondary Metabolite Targeting the Ribosome
Journal of the American Chemical Society.
2020 Oct
19;
Agarwal
Rupesh ,
Bensing
Barbara A. ,
Mi
Dehui ,
Vinson
Paige N. ,
Baudry
Jerome ,
Iverson
Tina M. ,
Smith
Jeremy C. ,
Structure based virtual screening identifies small molecule effectors for the sialoglycan binding protein Hsa
Biochemical Journal.
2020 Oct
16;
Stubbs
HE ,
Bensing
BA ,
Yamakawa
I ,
Sharma
P ,
Yu
H ,
Chen
X ,
Sullam
PM ,
Iverson
TM ,
Tandem sialoglycan-binding modules in a Streptococcus sanguinis serine-rich repeat adhesin create target dependent avidity effects
Journal of Biological Chemistry.
2020 Aug
20;
- PMID: 32820052 [PubMed].
Sharma
P ,
Maklashina
E ,
Cecchini
G ,
Iverson
T M ,
The roles of SDHAF2 and dicarboxylate in covalent flavinylation of SDHA, the human complex II flavoprotein
Proceedings of the National Academy of Sciences of the United States of America.
2020 Sep
4;
- PMID: 32887801 [PubMed].
Limbrick
Emilianne M. ,
Yñigez-Gutierrez
Audrey E. ,
Dulin
Callie C. ,
Derewacz
Dagmara K. ,
Spraggins
Jeffrey M. ,
McCulloch
Kathryn M. ,
Iverson
T. M. ,
Bachmann
Brian O. ,
Methyltransferase Contingencies in the Pathway of Everninomicin D Antibiotics and Analogues
ChemBioChem.
2020 Jul
19;
kaya
AI ,
Perry
NA ,
Gurevich
VV ,
Iverson
TM ,
Phosphorylation barcode-dependent signal bias of the dopamine D1 receptor
Proceedings of the National Academy of Sciences of the United States of America.
2020 Jun
23;
- PMID: 32503917 [PubMed].
- PMCID: PMC7321966.
2019
Sammons
RM ,
Perry
NA ,
Li
Y ,
Cho
EJ ,
Piserchio
A ,
Zamora-Olivares
DP ,
Ghose
R ,
Kaoud
TS ,
Debevec
G ,
Bartholomeusz
C ,
Gurevich
VV ,
Iverson
TM ,
Giulianotti
M ,
Houghten
RA ,
Dalby
KN ,
A novel class of common docking domain inhibitors that prevent ERK2 activation and substrate phosphorylation
ACS Chemical Biology.
2019 Jun
21;
- PMID: 31058487 [PubMed].
- PMCID: PMC7105935.
Perry
NA ,
Fialkowski
KP ,
Kaoud
TS ,
Kaya
AI ,
Chen
AL ,
Taliaferro
JM ,
Gurevich
VV ,
Dalby
KN ,
Iverson
TM ,
Arrestin-3 interaction with maternal embryonic leucine-zipper kinase
Cellular Signalling .
2019 Nov
;
- PMID: 31352007 [PubMed].
- PMCID: PMC6717526.
Berndt
S ,
Gurevich
VV ,
Iverson
TM ,
Crystal structure of the SH3 domain of human Lyn non-receptor tyrosine kinase
PLoS One.
2019 Apr
10;
- PMID: 30969999 [PubMed].
- PMCID: PMC6457566.
Bensing
Barbara A. ,
Li
Liang ,
Wong
Maurice ,
Barnard
Karen N. ,
Iverson
T. M. ,
Lebrilla
Carlito B. ,
Parrish
Colin R. ,
Thomas
Wendy E. ,
Xiong
Yan ,
Sullam
Paul M. ,
Recognition of specific sialoglycan structures by oral streptococci impacts the severity of endocardial infection
PLOS Pathogens.
2019 Jun
24;
Perry
NA ,
Kaoud
TS ,
Ortega
OO ,
Kaya
AI ,
Marcus
DJ ,
Pleinis
JM ,
Berndt
S ,
Chen
Q ,
Zhan
X ,
Dalby
KN ,
Lopez
CF ,
Iverson
TM ,
Gurevich
VV ,
Arrestin-3 scaffolding of the JNK3 cascade suggests a mechanism for signal amplification
Proceedings of the National Academy of Sciences of the United States of America.
2019 Jan
15;
- PMID: 30591558 [PubMed].
Sharma
P ,
Maklashina
E ,
Cecchini
G ,
Iverson
TM ,
Maturation of the respiratory complex II flavoprotein
Current opinion in structural biology.
2019 Mar
6;
59
38-46
- PMID: 30851631 [PubMed].
Perry
NA ,
Zhan
X ,
Gurevich
EV ,
Iverson
TM ,
Gurevich
VV ,
Using In Vitro Pull-Down and In-Cell Overexpression Assays to Study Protein Interactions with Arrestin
Methods in molecular biology (Clifton, N.J.).
2019 Mar
;
1957
107-120
- PMID: 30919350 [PubMed].
McCulloch
KM ,
Yamakawa
I ,
Shifrin
DA ,
McConnell
RE ,
Foegeding
NJ ,
Singh
PK ,
Mao
S ,
Tyska
MJ ,
Iverson
TM ,
An alternative N-terminal fold of the intestine-specific annexin A13a induces dimerization and regulates membrane-binding
The Journal of biological chemistry.
2019 Jan
4;
- PMID: 30610115 [PubMed].
2018
Badmalia
MD ,
Sharma
P ,
Yadav
SPS ,
Singh
S ,
Khatri
N ,
Garg
R ,
Ashish
FNU ,
Bonsai Gelsolin Survives Heat Induced Denaturation by Forming β-Amyloids which Leach Out Functional Monomer
Scientific Reports.
2018
;
8
- PMID: 30135452 [PubMed].
- PMCID: PMC6105678.
Sharma
P ,
Maklashina
E ,
Cecchini
G ,
Iverson
TM ,
Crystal structure of an assembly intermediate of respiratory Complex II.
Nature communications.
2018 Jan
18;
9
(1).
274
- PMID: 29348404 [PubMed].
- PMCID: PMC5773532.
Starbird
CA ,
Perry
NA ,
Chen
Q ,
Berndt
S ,
Yamakawa
I ,
Loukachevitch
LV ,
Limbrick
EM ,
Bachmann
BO ,
Iverson
TM ,
McCulloch
KM ,
The Structure of the Bifunctional Everninomicin Biosynthetic Enzyme EvdMO1 Suggests Independent Activity of the Fused Methyltransferase-Oxidase Domains
Biochemistry.
2018 Dec
7;
- PMID: 30525509 [PubMed].
Chen
Q ,
Iverson
TM ,
Gurevich
VV ,
Structural Basis of Arrestin-Dependent Signal Transduction.
Trends in biochemical sciences.
2018 Apr
7;
6
(43).
412-23
- PMID: 29636212 [PubMed].
Maklashina
E ,
Rajagukguk
S ,
Iverson
TM ,
Cecchini
G ,
The unassembled flavoprotein subunits of human and bacterial complex II have impaired catalytic activity and generate only minor amounts of ROS.
The Journal of biological chemistry.
2018 Apr
2;
20
(293).
7754-65
- PMID: 29610278 [PubMed].
Starbird
CA ,
Tomasiak
TM ,
Singh
PK ,
Yankovskaya
V ,
Maklashina
E ,
Eisenbach
M ,
Cecchini
G ,
Iverson
TM ,
New crystal forms of the integral membrane Escherichia coli quinol:fumarate reductase suggest that ligands control domain movement.
Journal of structural biology.
2018 Apr
;
202
(1).
100-104
- PMID: 29158068 [PubMed].
- PMCID: PMC5835405.
- NIHMSID: NIHMS925475
Tso
SC ,
Chen
Q ,
Vishnivetskiy
SA ,
Gurevich
VV ,
Iverson
TM ,
Brautigam
CA ,
Using two-site binding models to analyze microscale thermophoresis data.
Analytical biochemistry.
2018 Jan
1;
540-541
64-75
- PMID: 29054528 [PubMed].
- PMCID: PMC5906060.
- NIHMSID: NIHMS922807
2017
Chen
Q ,
Perry
NA ,
Vishnivetskiy
SA ,
Berndt
S ,
Gilbert
NC ,
Zhuo
Y ,
Singh
PK ,
Tholen
J ,
Ohi
MD ,
Gurevich
EV ,
Brautigam
CA ,
Klug
CS ,
Gurevich
VV ,
Iverson
TM ,
Structural basis of arrestin-3 activation and signaling.
Nature communications.
2017 Nov
10;
8
(1).
1427
- PMID: 29127291 [PubMed].
- PMCID: PMC5681653.
Starbird
CA ,
Maklashina
E ,
Sharma
P ,
Qualls-Histed
S ,
Cecchini
G ,
Iverson
TM ,
Structural and biochemical analyses reveal insights into covalent flavinylation of the Complex II homolog quinol:fumarate reductase.
The Journal of biological chemistry.
2017 Dec
4;
292
(31).
12921-12933
- PMID: 28615448 [PubMed].
- PMCID: PMC5546032.
Prokop
S ,
Perry
NA ,
Vishnivetskiy
SA ,
Toth
AD ,
Inoue
A ,
Milligan
G ,
Iverson
TM ,
Hunyady
L ,
Gurevich
VV ,
Differential manipulation of arrestin-3 binding to basal and agonist-activated G protein-coupled receptors.
Cellular signalling.
2017 Aug
;
36
98-107
- PMID: 28461104 [PubMed].
- PMCID: PMC5797668.
- NIHMSID: NIHMS936590
2016
Loukachevitch
LV ,
Bensing
BA ,
Yu
H ,
Zeng
J ,
Chen
X ,
Sullam
PM ,
Iverson
TM ,
Structures of the Streptococcus sanguinis SrpA Binding Region with Human Sialoglycans Suggest Features of the Physiological Ligand.
Biochemistry.
2016 Oct
11;
- PMID: 27685666 [PubMed].
- PMCID: PMC5388602.
- NIHMSID: NIHMS820432
Kaya
AI ,
Lokits
AD ,
Gilbert
JA ,
Iverson
TM ,
Meiler
J ,
Hamm
HE ,
A Conserved Hydrophobic Core in Gαi1 Regulates G Protein Activation and Release from Activated Receptor.
The Journal of biological chemistry.
2016 Dec
9;
291
(37).
19674-86
- PMID: 27462082 [PubMed].
- PMCID: PMC5016700.
Bensing
BA ,
Khedri
Z ,
Deng
L ,
Yu
H ,
Prakobphol
A ,
Fisher
SJ ,
Chen
X ,
Iverson
TM ,
Varki
A ,
Sullam
PM ,
Novel aspects of sialoglycan recognition by the Siglec-like domains of streptococcal SRR glycoproteins.
Glycobiology.
2016 Dec
;
26
(11).
1222-1234
- PMID: 27037304 [PubMed].
Zhan
X ,
Stoy
H ,
Kaoud
TS ,
Perry
NA ,
Chen
Q ,
Perez
A ,
Els-Heindl
S ,
Slagis
JV ,
Iverson
TM ,
Beck-Sickinger
AG ,
Gurevich
EV ,
Dalby
KN ,
Gurevich
VV ,
Peptide mini-scaffold facilitates JNK3 activation in cells.
Scientific reports.
2016 Feb
12;
6
21025
- PMID: 26868142 [PubMed].
- PMCID: PMC4751492.
Maklashina
E ,
Rajagukguk
S ,
Starbird
CA ,
McDonald
WH ,
Koganitsky
A ,
Eisenbach
M ,
Iverson
TM ,
Cecchini
G ,
Binding of the Covalent Flavin Assembly Factor to the Flavoprotein Subunit of Complex II.
The Journal of biological chemistry.
2016 Feb
5;
291
(6).
2904-16
- PMID: 26644464 [PubMed].
- PMCID: PMC4742753.
Bensing
BA ,
Loukachevitch
LV ,
McCulloch
KM ,
Yu
H ,
Vann
KR ,
Wawrzak
Z ,
Anderson
S ,
Chen
X ,
Sullam
PM ,
Iverson
TM ,
Structural Basis for Sialoglycan Binding by the Streptococcus sanguinis SrpA Adhesin.
The Journal of biological chemistry.
2016 Apr
1;
291
(14).
7230-40
- PMID: 26833566 [PubMed].
- PMCID: PMC4817157.
2015
McCulloch
KM ,
McCranie
EK ,
Smith
JA ,
Sarwar
M ,
Mathieu
JL ,
Gitschlag
BL ,
Du
Y ,
Bachmann
BO ,
Iverson
TM ,
Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proceedings of the National Academy of Sciences of the United States of America.
2015 Aug
3;
- PMID: 26240321 [PubMed].
Chen
Q ,
Vishnivetskiy
SA ,
Zhuang
T ,
Cho
MK ,
Thaker
TM ,
Sanders
CR ,
Gurevich
VV ,
Iverson
TM ,
The rhodopsin-arrestin-1 interaction in bicelles.
Methods in molecular biology (Clifton, N.J.).
2015
;
1271
77-95
- PMID: 25697518 [PubMed].
- PMCID: PMC4520306.
- NIHMSID: NIHMS709058
Kaya
AI ,
Iverson
TM ,
Hamm
HE ,
Functional stability of rhodopsin in a bicelle system: evaluating G protein activation by rhodopsin in bicelles.
Methods in molecular biology (Clifton, N.J.).
2015
;
1271
67-76
- PMID: 25697517 [PubMed].
2014
Vishnivetskiy
SA ,
Zhan
X ,
Chen
Q ,
Iverson
TM ,
Gurevich
VV ,
Arrestin expression in E. coli and purification.
Current protocols in pharmacology.
2014 Dec
1;
67
Unit 2.11.1-19
- PMID: 25446290 [PubMed].
- PMCID: PMC4260927.
- NIHMSID: NIHMS646566
Kaya
AI ,
Lokits
AD ,
Gilbert
JA ,
Iverson
TM ,
Meiler
J ,
Hamm
HE ,
A conserved phenylalanine as a relay between the α5 helix and the GDP binding region of heterotrimeric Gi protein α subunit.
The Journal of biological chemistry.
2014 Aug
29;
289
(35).
24475-87
- PMID: 25037222 [PubMed].
- PMCID: PMC4148873.
Birmingham
WR ,
Starbird
CA ,
Panosian
TD ,
Nannemann
DP ,
Iverson
TM ,
Bachmann
BO ,
Bioretrosynthetic construction of a didanosine biosynthetic pathway.
Nature chemical biology.
2014 May
;
10
(5).
392-9
- PMID: 24657930 [PubMed].
- PMCID: PMC4017637.
- NIHMSID: NIHMS570326
Thaker
TM ,
Sarwar
M ,
Preininger
AM ,
Hamm
HE ,
Iverson
TM ,
A transient interaction between the phosphate binding loop and switch I contributes to the allosteric network between receptor and nucleotide in Gαi1.
The Journal of biological chemistry.
2014 Apr
18;
289
(16).
11331-41
- PMID: 24596087 [PubMed].
- PMCID: PMC4036270.
2013
Seo
HS ,
Minasov
G ,
Seepersaud
R ,
Doran
KS ,
Dubrovska
I ,
Shuvalova
L ,
Anderson
WF ,
Iverson
TM ,
Sullam
PM ,
Characterization of fibrinogen binding by glycoproteins Srr1 and Srr2 of Streptococcus agalactiae.
The Journal of biological chemistry.
2013 Dec
13;
288
(50).
35982-96
- PMID: 24165132 [PubMed].
- PMCID: PMC3861647.
Singh
PK ,
Sarwar
M ,
Maklashina
E ,
Kotlyar
V ,
Rajagukguk
S ,
Tomasiak
TM ,
Cecchini
G ,
Iverson
TM ,
Plasticity of the quinone-binding site of the complex II homolog quinol:fumarate reductase.
The Journal of biological chemistry.
2013 Aug
23;
288
(34).
24293-301
- PMID: 23836905 [PubMed].
- PMCID: PMC3750132.
Iverson
TM ,
Sexism: A revealing experiment.
Nature.
2013 Apr
4;
496
(7443).
31
- PMID: 23552935 [PubMed].
Zhuang
T ,
Chen
Q ,
Cho
MK ,
Vishnivetskiy
SA ,
Iverson
TM ,
Gurevich
VV ,
Sanders
CR ,
Involvement of distinct arrestin-1 elements in binding to different functional forms of rhodopsin.
Proceedings of the National Academy of Sciences of the United States of America.
2013 Jan
15;
110
(3).
942-7
- PMID: 23277586 [PubMed].
- PMCID: PMC3549108.
Vishnivetskiy
SA ,
Chen
Q ,
Palazzo
MC ,
Brooks
EK ,
Altenbach
C ,
Iverson
TM ,
Hubbell
WL ,
Gurevich
VV ,
Engineering visual arrestin-1 with special functional characteristics.
The Journal of biological chemistry.
2013 Feb
1;
288
(5).
3394-405
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- PMCID: PMC3561558.
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