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Patton Lab Publications

2017

Rao MB , Didiano D , Patton JG , Neurotransmitter-Regulated Regeneration in the Zebrafish Retina. Stem cell reports. 2017 Dec 11; 8 (4). 831-842
Lu Y , Zhao X , Liu Q , Li C , Graves-Deal R , Cao Z , Singh B , Franklin JL , Wang J , Hu H , Wei T , Yang M , Yeatman TJ , Lee E , Saito-Diaz K , Hinger S , Patton JG , Chung CH , Emmrich S , Klusmann JH , Fan D , Coffey RJ , lncRNA MIR100HG-derived miR-100 and miR-125b mediate cetuximab resistance via Wnt/β-catenin signali… Nature medicine. 2017 Nov ; 23 (11). 1331-1341
Kara N , Wei C , Commanday AC , Patton JG , miR-27 regulates chondrogenesis by suppressing focal adhesion kinase during pharyngeal arch developm… Developmental biology. 2017 Dec 1; 429 (1). 321-334
Flynt AS , Rao M , Patton JG , Blocking Zebrafish MicroRNAs with Morpholinos. Methods in molecular biology (Clifton, N.J.). 2017 ; 1565 59-78

2016

Dou Y , Cha DJ , Franklin JL , Higginbotham JN , Jeppesen DK , Weaver AM , Prasad N , Levy S , Coffey RJ , Patton JG , Zhang B , Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosome… Scientific reports. 2016 Nov 28; 6 37982
McKenzie AJ , Hoshino D , Hong NH , Cha DJ , Franklin JL , Coffey RJ , Patton JG , Weaver AM , KRAS-MEK Signaling Controls Ago2 Sorting into Exosomes. Cell reports. 2016 May 3; 15 (5). 978-87
Khuansuwan S , Clanton JA , Dean BJ , Patton JG , Gamse JT , A transcription factor network controls cell migration and fate decisions in the developing zebrafis… Development (Cambridge, England). 2016 Jul 15; 143 (14). 2641-50

2015

Yin L , Maddison LA , Li M , Kara N , LaFave MC , Varshney GK , Burgess SM , Patton JG , Chen W , Multiplex Conditional Mutagenesis Using Transgenic Expression of Cas9 and sgRNAs. Genetics. 2015 Jun ; 200 (2). 431-41
Patton JG , Franklin JL , Weaver AM , Vickers K , Zhang B , Coffey RJ , Ansel KM , Blelloch R , Goga A , Huang B , L'Etoille N , Raffai RL , Lai CP , Krichevsky AM , Mateescu B , Greiner VJ , Hunter C , Voinnet O , McManus MT , Biogenesis, delivery, and function of extracellular RNA. Journal of extracellular vesicles. 2015 ; 4 27494
Cha DJ , Franklin JL , Dou Y , Liu Q , Higginbotham JN , Demory Beckler M , Weaver AM , Vickers K , Prasad N , Levy S , Zhang B , Coffey RJ , Patton JG , KRAS-dependent sorting of miRNA to exosomes. eLife. 2015 ; 4 e07197
Olena AF , Rao MB , Thatcher EJ , Wu SY , Patton JG , miR-216a regulates snx5, a novel notch signaling pathway component, during zebrafish retinal develop… Developmental biology. 2015 Jan 30;

2014

Rajaram K , Summerbell ER , Patton JG , Technical brief: Constant intense light exposure to lesion and initiate regeneration in normally pig… Molecular vision. 2014 ; 20 1075-84
Rajaram K , Harding RL , Bailey T , Patton JG , Hyde DR , Dynamic miRNA expression patterns during retinal regeneration in zebrafish: reduced dicer or miRNA e… Developmental dynamics : an official publication of the American Association of Anatomists. 2014 Dec ; 243 (12). 1591-605
Andrews OE , Cha DJ , Wei C , Patton JG , RNAi-mediated gene silencing in zebrafish triggered by convergent transcription. Scientific reports. 2014 ; 4 5222
Rajaram K , Harding RL , Hyde DR , Patton JG , miR-203 regulates progenitor cell proliferation during adult zebrafish retina regeneration. Developmental biology. 2014 Aug 15; 392 (2). 393-403

2013

Noto JM , Piazuelo MB , Chaturvedi R , Bartel CA , Thatcher EJ , Delgado A , Romero-Gallo J , Wilson KT , Correa P , Patton JG , Peek RM , Strain-specific suppression of microRNA-320 by carcinogenic Helicobacter pylori promotes expression … American journal of physiology. Gastrointestinal and liver physiology. 2013 Dec ; 305 (11). G786-96
Wei C , Thatcher EJ , Olena AF , Cha DJ , Perdigoto AL , Marshall AF , Carter BD , Broadie K , Patton JG , miR-153 regulates SNAP-25, synaptic transmission, and neuronal development. PloS one. 2013 ; 8 (2). e57080

2012

Wei C , Salichos L , Wittgrove CM , Rokas A , Patton JG , Transcriptome-wide analysis of small RNA expression in early zebrafish development. RNA (New York, N.Y.). 2012 May ; 18 (5). 915-29

2011

Li N , Wei C , Olena AF , Patton JG , Regulation of endoderm formation and left-right asymmetry by miR-92 during early zebrafish developme… Development (Cambridge, England). 2011 May ; 138 (9). 1817-26

2010

Flynt AS , Patton JG , Crosstalk between planar cell polarity signaling and miR-8 control of NHERF1-mediated actin reorgani… Cell cycle (Georgetown, Tex.). 2010 Jan 15; 9 (2). 235-7
Olena AF , Patton JG , Genomic organization of microRNAs. Journal of cellular physiology. 2010 Mar ; 222 (3). 540-5

2009

Hamid R , Phillips JA , Holladay C , Cogan JD , Austin ED , Backeljauw PF , Travers SH , Patton JG , A molecular basis for variation in clinical severity of isolated growth hormone deficiency type II. The Journal of clinical endocrinology and metabolism. 2009 Dec ; 94 (12). 4728-34
Qiu R , Liu K , Liu Y , Mo W , Flynt AS , Patton JG , Kar A , Wu JY , He R , The role of miR-124a in early development of the Xenopus eye. Mechanisms of development. 2009 Oct ; 126 (10). 804-16
Flynt AS , Thatcher EJ , Burkewitz K , Li N , Liu Y , Patton JG , miR-8 microRNAs regulate the response to osmotic stress in zebrafish embryos. The Journal of cell biology. 2009 Apr 6; 185 (1). 115-27

2008

Shariat N , Ryther RC , Phillips JA , Robinson IC , Patton JG , Rescue of pituitary function in a mouse model of isolated growth hormone deficiency type II by RNA i… Endocrinology. 2008 Feb ; 149 (2). 580-6
Solis AS , Shariat N , Patton JG , Splicing fidelity, enhancers, and disease. Frontiers in bioscience : a journal and virtual library. 2008 ; 13 1926-42
Shariat N , Holladay CD , Cleary RK , Phillips JA , Patton JG , Isolated growth hormone deficiency type II caused by a point mutation that alters both splice site s… Clinical genetics. 2008 Dec ; 74 (6). 539-45
Thatcher EJ , Paydar I , Anderson KK , Patton JG , Regulation of zebrafish fin regeneration by microRNAs. Proceedings of the National Academy of Sciences of the United States of America. 2008 Nov 25; 105 (47). 18384-9
Solis AS , Peng R , Crawford JB , Phillips JA , Patton JG , Growth hormone deficiency and splicing fidelity: two serine/arginine-rich proteins, ASF/SF2 and SC35… The Journal of biological chemistry. 2008 Aug 29; 283 (35). 23619-26
Li N , Flynt AS , Kim HR , Solnica-Krezel L , Patton JG , Dispatched Homolog 2 is targeted by miR-214 through a combination of three weak microRNA recognition… Nucleic acids research. 2008 Aug ; 36 (13). 4277-85
Thatcher EJ , Bond J , Paydar I , Patton JG , Genomic organization of zebrafish microRNAs. BMC genomics. 2008 ; 9 253

2007

Thatcher EJ , Flynt AS , Li N , Patton JR , Patton JG , MiRNA expression analysis during normal zebrafish development and following inhibition of the Hedgeh… Developmental dynamics : an official publication of the American Association of Anatomists. 2007 Aug ; 236 (8). 2172-80
Flynt AS , Li N , Thatcher EJ , Solnica-Krezel L , Patton JG , Zebrafish miR-214 modulates Hedgehog signaling to specify muscle cell fate. Nature genetics. 2007 Feb ; 39 (2). 259-63

2006

Peng R , Hawkins I , Link AJ , Patton JG , The splicing factor PSF is part of a large complex that assembles in the absence of pre-mRNA and con… RNA biology. 2006 Apr ; 3 (2). 69-76
Crawford JB , Patton JG , Activation of alpha-tropomyosin exon 2 is regulated by the SR protein 9G8 and heterogeneous nuclear … Molecular and cellular biology. 2006 Dec ; 26 (23). 8791-802

2005

Shav-Tal Y , Blechman J , Darzacq X , Montagna C , Dye BT , Patton JG , Singer RH , Zipori D , Dynamic sorting of nuclear components into distinct nucleolar caps during transcriptional inhibition… Molecular biology of the cell. 2005 May ; 16 (5). 2395-413
Ryther RC , Flynt AS , Phillips JA , Patton JG , siRNA therapeutics: big potential from small RNAs. Gene therapy. 2005 Jan ; 12 (1). 5-11

2004

Ryther RC , Flynt AS , Harris BD , Phillips JA , Patton JG , GH1 splicing is regulated by multiple enhancers whose mutation produces a dominant-negative GH isofo… Endocrinology. 2004 Jun ; 145 (6). 2988-96

2003

Li J , Hawkins IC , Harvey CD , Jennings JL , Link AJ , Patton JG , Regulation of alternative splicing by SRrp86 and its interacting proteins. Molecular and cellular biology. 2003 Nov ; 23 (21). 7437-47
Ryther RC , McGuinness LM , Phillips JA , Moseley CT , Magoulas CB , Robinson IC , Patton JG , Disruption of exon definition produces a dominant-negative growth hormone isoform that causes somato… Human genetics. 2003 Jul ; 113 (2). 140-8

2002

Peng R , Dye BT , Pérez I , Barnard DC , Thompson AB , Patton JG , PSF and p54nrb bind a conserved stem in U5 snRNA. RNA (New York, N.Y.). 2002 Oct ; 8 (10). 1334-47
Li J , Barnard DC , Patton JG , A unique glutamic acid-lysine (EK) domain acts as a splicing inhibitor. The Journal of biological chemistry. 2002 Oct 18; 277 (42). 39485-92
Barnard DC , Li J , Peng R , Patton JG , Regulation of alternative splicing by SRrp86 through coactivation and repression of specific SR prot… RNA (New York, N.Y.). 2002 Apr ; 8 (4). 526-33

Thatcher EJ , Patton JG , Small RNAs have a big impact on regeneration. RNA biology. ; 7 (3). 333-8