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MSRC Proteomics Core Laboratory

MSRC Proteomics Core Laboratory Publications

2020

Lin AS , Dooyema SDR , Frick-Cheng AE , Harvey ML , Suarez G , Loh JT , McDonald WH , McClain MS , Peek RM , Cover TL , Bacterial Energetic Requirements for Helicobacter pylori Cag Type IV Secretion System-Dependent Alterations in Gastric Epithelial Cells Infection and immunity. 2020 Jan 22; 88 (2).

2019

Anderson DM , Nye-Wood MG , Rose KL , Donaldson PJ , Grey AC , Schey KL , MALDI imaging mass spectrometry of β- and γ-crystallins in the ocular lens Journal of mass spectrometry : JMS. 2019 Nov 12;
Gobert AP , Latour YL , Asim M , Finley JL , Verriere TG , Barry DP , Milne GL , Luis PB , Schneider C , Rivera ES , Lindsey-Rose K , Schey KL , Delgado AG , Sierra JC , Piazuelo MB , Wilson KT , Bacterial Pathogens Hijack the Innate Immune Response by Activation of the Reverse Transsulfuration Pathway mBio. 2019 Oct 29; 10 (5).
Tripathi A , Singha UK , Paromov V , Hill S , Pratap S , Rose K , Chaudhuri M , The Cross Talk between TbTim50 and PIP39, Two Aspartate-Based Protein Phosphatases, Maintains Cellular Homeostasis in Trypanosoma brucei mSphere. 2019 Aug 7; 4 (4).
Caston RR , Loh JT , Voss BJ , McDonald WH , Scholz MB , McClain MS , Cover TL , Effect of environmental salt concentration on the Helicobacter pylori exoproteome Journal of proteomics. 2019 May 4; 202 103374
Yim YY , Betke KM , McDonald WH , Gilsbach R , Chen Y , Hyde K , Wang Q , Hein L , Hamm H , The in vivo specificity of synaptic Gβ and Gγ subunits to the α adrenergic receptor at CNS synapses Scientific reports. 2019 Feb 8; 9 (1). 1718
Ahmed SM , Nishida-Fukuda H , Li Y , McDonald WH , Gradinaru CC , Macara IG , Publisher Correction: Exocyst dynamics during vesicle tethering and fusion Nature communications. 2019 Jan 15; 10 (1). 326
Linder JE , Batey K , Johnston R , Cohen EM , Wang Y , Wang X , Zaleski NM , Rogers LM , McDonald WH , Reyzer ML , Judd A , Goldstein J , Correa H , Pulley J , Aronoff DM , The PathLink Acquired Gestational Tissue Bank: Feasibility of Project PLACENTA Journal of reproductive biotechnology & fertility. 2019 Jan 9; 7 14-27

2018

Ahmed SM , Nishida-Fukuda H , Li Y , McDonald WH , Gradinaru CC , Macara IG , Exocyst dynamics during vesicle tethering and fusion Nature communications. 2018 Dec 3; 9 (1). 5140
Noto JM , Rose KL , Hachey AJ , Delgado AG , Romero-Gallo J , Wroblewski LE , Schneider BG , Shah SC , Cover TL , Wilson KT , Israel DA , Roa JC , Schey KL , Zavros Y , Piazuelo MB , Peek RM , Carcinogenic Helicobacter pylori Strains Selectively Dysregulate the Gastric Proteome, Which May Be Associated with Stomach Cancer Progression Molecular & cellular proteomics : MCP. 2018 Nov 19; 18 (2). 352-371
Paul S , McDonald WH , Moye-Rowley WS , Negative regulation of Candida glabrata Pdr1 by the deubiquitinase subunit Bre5 occurs in a ubiquitin independent manner Molecular microbiology. 2018 Sep 30; 110 (2). 309-323
Galligan JJ , Wepy JA , Streeter MD , Kingsley PJ , Mitchener MM , Wauchope OR , Beavers WN , Rose KL , Wang T , Spiegel DA , Marnett LJ , Methylglyoxal-derived posttranslational arginine modifications are abundant histone marks Proceedings of the National Academy of Sciences of the United States of America. 2018 Aug 27; 115 (37). 9228-9233
Ng VH , Hang BI , Sawyer LM , Neitzel LR , Crispi EE , Rose KL , Popay TM , Zhong A , Lee LA , Tansey WP , Huppert S , Lee E , Phosphorylation of XIAP at threonine 180 controls its activity in Wnt signaling Journal of cell science. 2018 May 22; 131 (10).
McNeil JB , Shaver CM , Kerchberger VE , Russell DW , Grove BS , Warren MA , Wickersham NE , Ware LB , McDonald WH , Bastarache JA , Novel Method for Noninvasive Sampling of the Distal Airspace in Acute Respiratory Distress Syndrome American journal of respiratory and critical care medicine. 2018 Apr 15; 197 (8). 1027-1035
Ryan DJ , Nei D , Prentice BM , Rose KL , Caprioli RM , Spraggins JM , Protein identification in imaging mass spectrometry through spatially targeted liquid micro-extractions Rapid communications in mass spectrometry : RCM. 2018 Mar 15; 32 (5). 442-450
Cassat JE , Moore JL , Wilson KJ , Stark Z , Prentice BM , Van de Plas R , Perry WJ , Zhang Y , Virostko J , Colvin DC , Rose KL , Judd AM , Reyzer ML , Spraggins JM , Grunenwald CM , Gore JC , Caprioli RM , Skaar EP , Integrated molecular imaging reveals tissue heterogeneity driving host-pathogen interactions Science translational medicine. 2018 Mar 14; 10 (432).

2017

Mishra S , Wu SY , Fuller AW , Wang Z , Rose KL , Schey KL , Mchaourab HS , Loss of αB-crystallin function in zebrafish reveals critical roles in the development of the lens and stress resistance of the heart The Journal of biological chemistry. 2017 Nov 21; 293 (2). 740-753
Lee S , Tumolo JM , Ehlinger AC , Jernigan KK , Qualls-Histed SJ , Hsu PC , McDonald WH , Chazin WJ , MacGurn JA , Ubiquitin turnover and endocytic trafficking in yeast are regulated by Ser57 phosphorylation of ubiquitin eLife. 2017 Nov 13; 6
Yim YY , McDonald WH , Hyde K , Cruz-Rodríguez O , Tesmer JJG , Hamm HE , Quantitative Multiple-Reaction Monitoring Proteomic Analysis of Gβ and Gγ Subunits in C57Bl6/J Brain Synaptosomes Biochemistry. 2017 Sep 21; 56 (40). 5405-5416
Amara S , Majors C , Roy B , Hill S , Rose KL , Myles EL , Tiriveedhi V , Critical role of SIK3 in mediating high salt and IL-17 synergy leading to breast cancer cell proliferation PloS one. 2017 Jun 28; 12 (6). e0180097
Beavers WN , Rose KL , Galligan JJ , Mitchener MM , Rouzer CA , Tallman KA , Lamberson CR , Wang X , Hill S , Ivanova PT , Brown HA , Zhang B , Porter NA , Marnett LJ , Protein Modification by Endogenously Generated Lipid Electrophiles: Mitochondria as the Source and Target ACS chemical biology. 2017 Jun 28; 12 (8). 2062-2069
Hiday AC , Edler MC , Salek AB , Morris CW , Thang M , Rentz TJ , Rose KL , Jones LM , Baucum AJ , Mechanisms and Consequences of Dopamine Depletion-Induced Attenuation of the Spinophilin/Neurofilament Medium Interaction Neural plasticity. 2017 May 28; 2017 4153076
Wattacheril J , Rose KL , Hill S , Lanciault C , Murray CR , Washington K , Williams B , English W , Spann M , Clements R , Abumrad N , Flynn CR , Non-alcoholic fatty liver disease phosphoproteomics: A functional piece of the precision puzzle Hepatology research : the official journal of the Japan Society of Hepatology. 2017 Apr 19; 47 (13). 1469-1483
Norris JL , Farrow MA , Gutierrez DB , Palmer LD , Muszynski N , Sherrod SD , Pino JC , Allen JL , Spraggins JM , Lubbock AL , Jordan A , Burns W , Poland JC , Romer C , Manier ML , Nei YW , Prentice BM , Rose KL , Hill S , Van de Plas R , Tsui T , Braman NM , Keller MR , Rutherford SA , Lobdell N , Lopez CF , Lacy DB , McLean JA , Wikswo JP , Skaar EP , Caprioli RM , Integrated, High-Throughput, Multiomics Platform Enables Data-Driven Construction of Cellular Responses and Reveals Global Drug Mechanisms of Action Journal of proteome research. 2017 Feb 9; 16 (3). 1364-1375
Panaccione A , Zhang Y , Mi Y , Mitani Y , Yan G , Prasad ML , McDonald WH , El-Naggar AK , Yarbrough WG , Ivanov SV , Chromosomal abnormalities and molecular landscape of metastasizing mucinous salivary adenocarcinoma Oral oncology. 2017 Jan 9; 66 38-45
Camarillo JM , Ullery JC , Rose KL , Marnett LJ , Electrophilic Modification of PKM2 by 4-Hydroxynonenal and 4-Oxononenal Results in Protein Cross-Linking and Kinase Inhibition Chemical research in toxicology. 2017 Jan 3; 30 (2). 635-641

2016

Zheng J , Gao M , Huynh N , Tindell SJ , Vo HD , McDonald WH , Arkov AL , In vivo mapping of a dynamic ribonucleoprotein granule interactome in early embryos FEBS open bio. 2016 Oct 25; 6 (12). 1248-1256
Romano-Keeler J , Azcarate-Peril MA , Weitkamp JH , Slaughter JC , McDonald WH , Meng S , Latuga MS , Wynn JL , Oral colostrum priming shortens hospitalization without changing the immunomicrobial milieu Journal of perinatology : official journal of the California Perinatal Association. 2016 Sep 29; 37 (1). 36-41
Wenke JL , McDonald WH , Schey KL , Spatially Directed Proteomics of the Human Lens Outer Cortex Reveals an Intermediate Filament Switch Associated With the Remodeling Zone Investigative ophthalmology & visual science. 2016 Aug 1; 57 (10). 4108-14
Schey KL , Hachey AJ , Rose KL , Grey AC , MALDI imaging mass spectrometry of Pacific White Shrimp L. vannamei and identification of abdominal muscle proteins Proteomics. 2016 May 9; 16 (11-12). 1767-74
Mont S , Davies SS , Roberts Second LJ , Mernaugh RL , McDonald WH , Segal BH , Zackert W , Kropski JA , Blackwell TS , Sekhar KR , Galligan JJ , Massion PP , Marnett LJ , Travis EL , Freeman ML , Accumulation of isolevuglandin-modified protein in normal and fibrotic lung Scientific reports. 2016 Apr 27; 6 24919
Camarillo JM , Rose KL , Galligan JJ , Xu S , Marnett LJ , Covalent Modification of CDK2 by 4-Hydroxynonenal as a Mechanism of Inhibition of Cell Cycle Progression Chemical research in toxicology. 2016 Mar 11; 29 (3). 323-32
Anderson DM , Van de Plas R , Rose KL , Hill S , Schey KL , Solga AC , Gutmann DH , Caprioli RM , 3-D imaging mass spectrometry of protein distributions in mouse Neurofibromatosis 1 (NF1)-associated optic glioma Journal of proteomics. 2016 Feb 13; 149 77-84
Layer JH , Alford CE , McDonald WH , Davé UP , LMO2 Oncoprotein Stability in T-Cell Leukemia Requires Direct LDB1 Binding Molecular and cellular biology. 2016 Feb 1; 36 (3). 488-506
McCann TS , Guo Y , McDonald WH , Tansey WP , Antagonistic roles for the ubiquitin ligase Asr1 and the ubiquitin-specific protease Ubp3 in subtelomeric gene silencing Proceedings of the National Academy of Sciences of the United States of America. 2016 Jan 19; 113 (5). 1309-14
Frick-Cheng AE , Pyburn TM , Voss BJ , McDonald WH , Ohi MD , Cover TL , Molecular and Structural Analysis of the Helicobacter pylori cag Type IV Secretion System Core Complex mBio. 2016 Jan 12; 7 (1). e02001-15
Snider CA , Voss BJ , McDonald WH , Cover TL , Growth phase-dependent composition of the Helicobacter pylori exoproteome Journal of proteomics. 2016 Jan 1; 130 94-107

2015

Baucum AJ , Shonesy BC , Rose KL , Colbran RJ , Quantitative proteomics analysis of CaMKII phosphorylation and the CaMKII interactome in the mouse forebrain. ACS chemical neuroscience. 2015 Feb 4;
Mathews TP , Hill S , Rose KL , Ivanova PT , Lindsley CW , Brown HA , Human phospholipase D activity transiently regulates pyrimidine biosynthesis in malignant gliomas. ACS chemical biology. 2015 Feb 3;
Raju M , Mooney BP , Thakkar KM , Giblin FJ , Schey KL , Sharma KK , Role of αA-crystallin-derived αA66-80 peptide in guinea pig lens crystallin aggregation and insolubilization. Experimental eye research. 2015 Jan 29;
Brown KL , Darris C , Rose KL , Sanchez OA , Madu H , Avance J , Brooks N , Zhang MZ , Fogo A , Harris R , Hudson BG , Voziyan P , Hypohalous Acids Contribute to Renal Extracellular Matrix Damage in Experimental Diabetes. Diabetes. 2015 Jan 20;
Petrova RS , Schey KL , Donaldson PJ , Grey AC , Spatial distributions of AQP5 and AQP0 in embryonic and postnatal mouse lens development. Experimental eye research. 2015 Jan 13; 132C 124-135
Shou Y , Robinson DM , Amakye DD , Rose KL , Cho YJ , Ligon KL , Sharp T , Haider AS , Bandaru R , Ando Y , Geoerger B , Doz F , Ashley DM , Hargrave DR , Casanova M , Tawbi HA , Rodon J , Thomas AL , Mita AC , MacDonald TJ , Kieran MW , A five-gene hedgehog signature developed as a patient preselection tool for hedgehog inhibitor therapy in medulloblastoma. Clinical cancer research : an official journal of the American Association for Cancer Research. 2015 Feb 1; 21 (3). 585-93
Amara S , Lopez K , Banan B , Brown SK , Whalen M , Myles E , Ivy MT , Johnson T , Schey KL , Tiriveedhi V , Synergistic effect of pro-inflammatory TNFα and IL-17 in periostin mediated collagen deposition: Potential role in liver fibrosis. Molecular immunology. 2015 Mar ; 64 (1). 26-35
Qi Y , Wang X , Rose KL , MacDonald WH , Zhang B , Schey KL , Luther JM , Activation of the Endogenous Renin-Angiotensin-Aldosterone System or Aldosterone Administration Increases Urinary Exosomal Sodium Channel Excretion Journal of the American Society of Nephrology : JASN. 2015 Jun 25; 27 (2). 646-56
Maklashina E , Rajagukguk S , Starbird CA , McDonald WH , Koganitsky A , Eisenbach M , Iverson TM , Cecchini G , Binding of the Covalent Flavin Assembly Factor to the Flavoprotein Subunit of Complex II The Journal of biological chemistry. 2015 Dec 7; 291 (6). 2904-16
Wenke JL , Rose KL , Spraggins JM , Schey KL , MALDI Imaging Mass Spectrometry Spatially Maps Age-Related Deamidation and Truncation of Human Lens Aquaporin-0 Investigative ophthalmology & visual science. 2015 Nov 10; 56 (12). 7398-405
Snider CA , Voss BJ , McDonald WH , Cover TL , Supporting data for analysis of the Helicobacter pylori exoproteome Data in brief. 2015 Oct 17; 5 560-3
Voss BJ , Loh JT , Hill S , Rose KL , McDonald WH , Cover TL , Alteration of the Helicobacter pylori membrane proteome in response to changes in environmental salt concentration Proteomics. Clinical applications. 2015 Sep 14; 9 (11-12). 1021-34
Dungrawala H , Rose KL , Bhat KP , Mohni KN , Glick GG , Couch FB , Cortez D , The Replication Checkpoint Prevents Two Types of Fork Collapse without Regulating Replisome Stability Molecular cell. 2015 Sep 10; 59 (6). 998-1010
Patel S , Ling J , Kim SJ , Schey KL , Rose K , Kuchtey RW , Proteomic Analysis of Macular Fluid Associated With Advanced Glaucomatous Excavation JAMA ophthalmology. 2015 Sep 9; 134 (1). 108-10
Madu H , Avance J , Chetyrkin S , Darris C , Rose KL , Sanchez OA , Hudson B , Voziyan P , Pyridoxamine protects proteins from damage by hypohalous acids in vitro and in vivo Free radical biology & medicine. 2015 Jul 6; 89 83-90
Gelfand BD , Wright CB , Kim Y , Yasuma T , Yasuma R , Li S , Fowler BJ , Bastos-Carvalho A , Kerur N , Uittenbogaard A , Han YS , Lou D , Kleinman ME , McDonald WH , Núñez G , Georgel P , Dunaief JL , Ambati J , Iron Toxicity in the Retina Requires Alu RNA and the NLRP3 Inflammasome Cell reports. 2015 Jun 11; 11 (11). 1686-93
Soss SE , Rose KL , Hill S , Jouan S , Chazin WJ , Biochemical and Proteomic Analysis of Ubiquitination of Hsc70 and Hsp70 by the E3 Ligase CHIP PloS one. 2015 May 26; 10 (5). e0128240
Schey KL , Luther JM , Rose KL , Proteomics characterization of exosome cargo Methods (San Diego, Calif.). 2015 Mar 31; 87 75-82
Aluise CD , Camarillo JM , Shimozu Y , Galligan JJ , Rose KL , Tallman KA , Marnett LJ , Site-specific, intramolecular cross-linking of Pin1 active site residues by the lipid electrophile 4-oxo-2-nonenal Chemical research in toxicology. 2015 Mar 18; 28 (4). 817-27

2014

Galligan JJ , Rose KL , Beavers WN , Hill S , Tallman KA , Tansey WP , Marnett LJ , Stable histone adduction by 4-oxo-2-nonenal: a potential link between oxidative stress and epigenetics. Journal of the American Chemical Society. 2014 Aug 27; 136 (34). 11864-6
Robertson WE , Rose KL , Hudson BG , Vanacore RM , Supramolecular organization of the α121-α565 collagen IV network. The Journal of biological chemistry. 2014 Sep 12; 289 (37). 25601-10
Sachewsky N , Leeder R , Xu W , Rose KL , Yu F , van der Kooy D , Morshead CM , Primitive neural stem cells in the adult mammalian brain give rise to GFAP-expressing neural stem cells. Stem cell reports. 2014 Jun 3; 2 (6). 810-24
Evans JC , Hines KM , Forsythe JG , Erdogan B , Shi M , Hill S , Rose KL , McLean JA , Webb DJ , Phosphorylation of serine 106 in Asef2 regulates cell migration and adhesion turnover. Journal of proteome research. 2014 Jul 3; 13 (7). 3303-13
Lleo A , Zhang W , McDonald WH , Seeley EH , Leung PS , Coppel RL , Ansari AA , Adams DH , Afford S , Invernizzi P , Gershwin ME , Shotgun proteomics: identification of unique protein profiles of apoptotic bodies from biliary epithelial cells. Hepatology (Baltimore, Md.). 2014 Oct ; 60 (4). 1314-23
Voss BJ , Gaddy JA , McDonald WH , Cover TL , Analysis of surface-exposed outer membrane proteins in Helicobacter pylori. Journal of bacteriology. 2014 Jul ; 196 (13). 2455-71
Ehrmann DC , Rose K , Calcutt MW , Beller AB , Hill S , Rogers TJ , Steele SD , Hachey DL , Aschner JL , Glutathionylated γG and γA subunits of hemoglobin F: a novel post-translational modification found in extremely premature infants by LC-MS and nanoLC-MS/MS. Journal of mass spectrometry : JMS. 2014 Feb ; 49 (2). 178-83
Libes JM , Seeley EH , Li M , Axt JR , Pierce J , Correa H , Newton M , Hansen E , Judd A , McDonald H , Caprioli RM , Naranjo A , Huff V , O'Neill JA , Lovvorn HN , , Race disparities in peptide profiles of North American and Kenyan Wilms tumor specimens. Journal of the American College of Surgeons. 2014 Apr ; 218 (4). 707-20
Dillon LM , Bean JR , Yang W , Shee K , Symonds LK , Balko JM , McDonald WH , Liu S , Gonzalez-Angulo AM , Mills GB , Arteaga CL , Miller TW , P-REX1 creates a positive feedback loop to activate growth factor receptor, PI3K/AKT and MEK/ERK signaling in breast cancer. Oncogene. 2014 Oct 6;
Shuck SC , Wauchope OR , Rose KL , Kingsley PJ , Rouzer CA , Shell SM , Sugitani N , Chazin WJ , Zagol-Ikapitte I , Boutaud O , Oates JA , Galligan JJ , Beavers WN , Marnett LJ , Protein modification by adenine propenal. Chemical research in toxicology. 2014 Oct 20; 27 (10). 1732-42
Markadieu N , Rios K , Spiller BW , McDonald WH , Welling PA , Delpire E , Short forms of Ste20-related proline/alanine-rich kinase (SPAK) in the kidney are created by aspartyl aminopeptidase (Dnpep)-mediated proteolytic cleavage. The Journal of biological chemistry. 2014 Oct 17; 289 (42). 29273-84
Jacobson R , Mignemi N , Rose K , O'Rear L , Sarilla S , Hamm HE , Barnett JV , Verhamme IM , Schoenecker J , The hyperglycemic byproduct methylglyoxal impairs anticoagulant activity through covalent adduction of antithrombin III Thrombosis research. 2014 Oct 5; 134 (6). 1350-7
Betke KM , Rose KL , Friedman DB , Baucum AJ , Hyde K , Schey KL , Hamm HE , Differential localization of G protein βγ subunits Biochemistry. 2014 Apr 1; 53 (14). 2329-43
Vassilopoulos A , Pennington JD , Andresson T , Rees DM , Bosley AD , Fearnley IM , Ham A , Flynn CR , Hill S , Rose KL , Kim HS , Deng CX , Walker JE , Gius D , SIRT3 deacetylates ATP synthase F1 complex proteins in response to nutrient- and exercise-induced stress Antioxidants & redox signaling. 2014 Mar 6; 21 (4). 551-64
Chaturvedi R , Asim M , Piazuelo MB , Yan F , Barry DP , Sierra JC , Delgado AG , Hill S , Casero RA , Bravo LE , Dominguez RL , Correa P , Polk DB , Washington MK , Rose KL , Schey KL , Morgan DR , Peek RM , Wilson KT , Activation of EGFR and ERBB2 by Helicobacter pylori results in survival of gastric epithelial cells with DNA damage Gastroenterology. 2014 Feb 13; 146 (7). 1739-51.e14
Kurokawa S , Eriksson S , Rose KL , Wu S , Motley AK , Hill S , Winfrey VP , McDonald WH , Capecchi MR , Atkins JF , Arnér ES , Hill KE , Burk RF , Sepp1(UF) forms are N-terminal selenoprotein P truncations that have peroxidase activity when coupled with thioredoxin reductase-1 Free radical biology & medicine. 2014 Jan 14; 69 67-76

2013

Shuck SC , Rose KL , Marnett LJ , Mass spectrometric methods for the analysis of nucleoside-protein cross-links: application to oxopropenyl-deoxyadenosine Chemical research in toxicology. 2013 Dec 20; 27 (1). 136-46
Fidler AL , Vanacore RM , Chetyrkin SV , Pedchenko VK , Bhave G , Yin VP , Stothers CL , Rose KL , McDonald WH , Clark TA , Borza DB , Steele RE , Ivy MT , , Hudson JK , Hudson BG , A unique covalent bond in basement membrane is a primordial innovation for tissue evolution Proceedings of the National Academy of Sciences of the United States of America. 2013 Dec 16; 111 (1). 331-6
McKinley ET , Liu H , McDonald WH , Luo W , Zhao P , Coffey RJ , Hanks SK , Manning HC , Global phosphotyrosine proteomics identifies PKCδ as a marker of responsiveness to Src inhibition in colorectal cancer PloS one. 2013 Nov 8; 8 (11). e80207
Chalkley RJ , Bandeira N , Chambers MC , Clauser KR , Cottrell JS , Deutsch EW , Kapp EA , Lam HH , McDonald WH , Neubert TA , Sun RX , Proteome informatics research group (iPRG)_2012: a study on detecting modified peptides in a complex mixture Molecular & cellular proteomics : MCP. 2013 Oct 31; 13 (1). 360-71
Sirbu BM , McDonald WH , Dungrawala H , Badu-Nkansah A , Kavanaugh GM , Chen Y , Tabb DL , Cortez D , Identification of proteins at active, stalled, and collapsed replication forks using isolation of proteins on nascent DNA (iPOND) coupled with mass spectrometry The Journal of biological chemistry. 2013 Sep 18; 288 (44). 31458-67
Schey KL , Anderson DM , Rose KL , Spatially-directed protein identification from tissue sections by top-down LC-MS/MS with electron transfer dissociation Analytical chemistry. 2013 Jul 2; 85 (14). 6767-74
DuMont AL , Yoong P , Day CJ , Alonzo F , McDonald WH , Jennings MP , Torres VJ , Staphylococcus aureus LukAB cytotoxin kills human neutrophils by targeting the CD11b subunit of the integrin Mac-1 Proceedings of the National Academy of Sciences of the United States of America. 2013 Jun 10; 110 (26). 10794-9
Dennis KE , Hill S , Rose KL , Sampson UK , Hill MF , Augmented cardiac formation of oxidatively-induced carbonylated proteins accompanies the increased functional severity of post-myocardial infarction heart failure in the setting of type 1 diabetes mellitus Cardiovascular pathology : the official journal of the Society for Cardiovascular Pathology. 2013 Apr 6; 22 (6). 473-80
Shonesy BC , Wang X , Rose KL , Ramikie TS , Cavener VS , Rentz T , Baucum AJ , Jalan-Sakrikar N , Mackie K , Winder DG , Patel S , Colbran RJ , CaMKII regulates diacylglycerol lipase-α and striatal endocannabinoid signaling Nature neuroscience. 2013 Mar 17; 16 (4). 456-63
Wang D , Dasari S , Chambers MC , Holman JD , Chen K , Liebler DC , Orton DJ , Purvine SO , Monroe ME , Chung CY , Rose KL , Tabb DL , Basophile: accurate fragment charge state prediction improves peptide identification rates Genomics, proteomics & bioinformatics. 2013 Mar 8; 11 (2). 86-95

2012

Aluise CD , Rose K , Boiani M , Reyzer ML , Manna JD , Tallman K , Porter NA , Marnett LJ , Peptidyl-prolyl cis/trans-isomerase A1 (Pin1) is a target for modification by lipid electrophiles Chemical research in toxicology. 2012 Dec 24; 26 (2). 270-9
Viquez OM , Caito SW , McDonald WH , Friedman DB , Valentine WM , Electrophilic adduction of ubiquitin activating enzyme E1 by N,N-diethyldithiocarbamate inhibits ubiquitin activation and is accompanied by striatal injury in the rat Chemical research in toxicology. 2012 Aug 22; 25 (11). 2310-21
Gibbons JG , Salichos L , Slot JC , Rinker DC , McGary KL , King JG , Klich MA , Tabb DL , McDonald WH , Rokas A , The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae Current biology : CB. 2012 Jul 12; 22 (15). 1403-9
Kurokawa S , Hill KE , McDonald WH , Burk RF , Long isoform mouse selenoprotein P (Sepp1) supplies rat myoblast L8 cells with selenium via endocytosis mediated by heparin binding properties and apolipoprotein E receptor-2 (ApoER2) The Journal of biological chemistry. 2012 Jul 2; 287 (34). 28717-26
Carter MD , Calcutt MW , Malow BA , Rose KL , Hachey DL , Quantitation of melatonin and n-acetylserotonin in human plasma by nanoflow LC-MS/MS and electrospray LC-MS/MS Journal of mass spectrometry : JMS. 2012 Mar 2; 47 (3). 277-85
Martinez MN , Emfinger CH , Overton M , Hill S , Ramaswamy TS , Cappel DA , Wu K , Fazio S , McDonald WH , Hachey DL , Tabb DL , Stafford JM , Obesity and altered glucose metabolism impact HDL composition in CETP transgenic mice: a role for ovarian hormones Journal of lipid research. 2012 Jan 3; 53 (3). 379-89

2011

Qureshi A , Grey A , Rose KL , Schey KL , Del Poeta M , Cryptococcus neoformans modulates extracellular killing by neutrophils Frontiers in microbiology. 2011 Sep 21; 2 193
Shaffer CL , Gaddy JA , Loh JT , Johnson EM , Hill S , Hennig EE , McClain MS , McDonald WH , Cover TL , Helicobacter pylori exploits a unique repertoire of type IV secretion system components for pilus assembly at the bacteria-host cell interface PLoS pathogens. 2011 Sep 1; 7 (9). e1002237
Sekhar KR , Reddy YT , Reddy PN , Crooks PA , Venkateswaran A , McDonald WH , Geng L , Sasi S , Van Der Waal RP , Roti JL , Salleng KJ , Rachakonda G , Freeman ML , The novel chemical entity YTR107 inhibits recruitment of nucleophosmin to sites of DNA damage, suppressing repair of DNA double-strand breaks and enhancing radiosensitization Clinical cancer research : an official journal of the American Association for Cancer Research. 2011 Aug 30; 17 (20). 6490-9
Boutté AM , McDonald WH , Shyr Y , Yang L , Lin PC , Characterization of the MDSC proteome associated with metastatic murine mammary tumors using label-free mass spectrometry and shotgun proteomics PloS one. 2011 Aug 10; 6 (8). e22446
Chetyrkin S , Mathis M , Pedchenko V , Sanchez OA , McDonald WH , Hachey DL , Madu H , Stec D , Hudson B , Voziyan P , Glucose autoxidation induces functional damage to proteins via modification of critical arginine residues Biochemistry. 2011 Jun 20; 50 (27). 6102-12

2010

Panosian TD , Nannemann DP , Watkins GR , Phelan VV , McDonald WH , Wadzinski BE , Bachmann BO , Iverson TM , Bacillus cereus phosphopentomutase is an alkaline phosphatase family member that exhibits an altered entry point into the catalytic cycle The Journal of biological chemistry. 2010 Dec 30; 286 (10). 8043-54
Tomasiak TM , Archuleta TL , Andréll J , Luna-Chávez C , Davis TA , Sarwar M , Ham AJ , McDonald WH , Yankovskaya V , Stern HA , Johnston JN , Maklashina E , Cecchini G , Iverson TM , Geometric restraint drives on- and off-pathway catalysis by the Escherichia coli menaquinol:fumarate reductase The Journal of biological chemistry. 2010 Nov 23; 286 (4). 3047-56
Torres VJ , Attia AS , Mason WJ , Hood MI , Corbin BD , Beasley FC , Anderson KL , Stauff DL , McDonald WH , Zimmerman LJ , Friedman DB , Heinrichs DE , Dunman PM , Skaar EP , Staphylococcus aureus fur regulates the expression of virulence factors that contribute to the pathogenesis of pneumonia Infection and immunity. 2010 Jan 25; 78 (4). 1618-28