{"id":135,"date":"2024-11-13T20:57:47","date_gmt":"2024-11-13T20:57:47","guid":{"rendered":"https:\/\/lab.prd.vanderbilt.edu\/mudumbi-lab\/?page_id=135"},"modified":"2026-03-17T21:07:22","modified_gmt":"2026-03-17T21:07:22","slug":"publications","status":"publish","type":"page","link":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"

Bauer, M.S.*, Zhang, J.Z.*, Wu, K.*, Lee, G.R.* \u2020<\/sup>, Coventry, B.* \u2020<\/sup>, Silvestri, I.M.<\/strong>*<\/strong>, Klupt, K.A., Shi, J., Brent, R.I., Li, X., Moller, C., Roullier, N.*, Vafeados, D.K., Kalvet, I., Skotheim, R.K., Zhu, S., Motmaen, A., Herrmann, L.C., Sturmfels, P., Tischer, D., Altae-Tran, H., Juergens, D., Krishna, R., Ahern, W., Yim, J., Bera, A.K., Kang, A., Joyce, E., Lu, A., Stewart, L., DiMaio, F., Mudumbi, K.C.\u2020<\/sup><\/strong>, Baker, D.\u2020<\/sup>\u00a0(2026). De novo<\/em> design of phosphotyrosine peptide binders.<\/a> bioRxiv<\/strong>.<\/p>\n

* Denotes equal contribution \u2020<\/sup> <\/strong>Denotes co-corresponding author<\/p>\n

Postdoc and graduate work:<\/h2>\n

Mudumbi, K.C.\u2020<\/sup><\/strong>, Burns, E.A., Schodt, D.J., Petrova, Z.O., Kiyatkin, A.B., Kim, L.W., Mangiacapre, E.M., Ortiz-Caraveo, I., Rivera Ortiz, H., Hu, C., Ashtekar, K.A., Lidke, K.A., Lidke, D.S.\u2020<\/sup>, Lemmon, M.A.\u2020<\/sup> (2024). Distinct interactions stabilize EGFR dimers and higher-order oligomers in cell membranes<\/a>. Cell Reports<\/strong>, 43(1).<\/p>\n

\u2020<\/sup><\/strong> Denotes co-corresponding author<\/p>\n

Li, T., Stayrook, S., Tsutsui, Y., Zhang, J., Wang, Y., Li, H., Proffitt, A., Krimmer, S., Ahmed, M., Belliveau, O., Walker, I., Mudumbi, K.C.<\/strong>, Suzuki, Y., Lax, I., Alvarado, D., Lemmon, M., Schlessinger, J., Klein, D. (2021). Structural basis for ligand reception by anaplastic lymphoma kinase<\/a>. Nature<\/strong>, 1-5.<\/p>\n

Mudumbi, K.C.\u2020<\/sup><\/strong>, Czapiewski, R., Ruba, A., Junod, S.L., Li, Y., Luo, W., Ngo, C., Ospina, V., Schirmer, E.C.\u2020<\/sup>, Yang, W.\u2020<\/sup> (2020). Nucleoplasmic signals enhance membrane protein import via multiple channels of the nuclear pore<\/a>. Nature Communications, <\/strong>11(1), 1-14.<\/p>\n

\u2020<\/sup><\/strong> Denotes co-corresponding author<\/p>\n

Tingey, M.*, Mudumbi, K.C.*<\/strong>, Schirmer, E.C., Yang, W. (2019). Casting a wider net: differentiating between inner nuclear envelope and outer nuclear envelope transmembrane proteins<\/a>. International Journal of Molecular Sciences<\/strong>, 20(21), p.5248.<\/p>\n

*<\/strong> Denotes equal contribution<\/p>\n

Mudumbi, K.C.<\/strong>, Yang, W. (2017). Determination of membrane protein distribution on the nuclear envelope by single-point single-molecule FRAP<\/a>. Current Protocols in Cell Biology<\/strong>, 76, 21.11.1-21.11.13. doi: 10.1002\/cpcb.27.<\/p>\n

Mudumbi, K.C.<\/strong>, Schirmer, E.C., Yang, W. (2016). Single-point single-molecule FRAP distinguishes inner and outer nuclear membrane protein distribution<\/a>. Nature Communications<\/strong>, 7:12562.<\/p>\n

Mudumbi, K.C.<\/strong>, and Yang, W. (2016). Probing protein distribution along the nuclear envelope in vivo<\/em> by using single-molecule FRAP<\/a>. Methods in Molecular Biology<\/strong> 1411, 113-122<\/p>\n

Mudumbi, K.C.<\/strong>, Julius, A., Herrmann, J., & Li, E. (2013). The pathogenic A391E mutation in FGFR3 induces a structural change in the transmembrane domain dimer<\/a>.\u00a0The Journal of Membrane Biology<\/strong>, 246(6), 487-493.<\/p>\n","protected":false},"excerpt":{"rendered":"

Bauer, M.S.*, Zhang, J.Z.*, Wu, K.*, Lee, G.R.* \u2020, Coventry, B.* \u2020, Silvestri, I.M.*, Klupt, K.A., Shi, J., Brent, R.I., Li, X., Moller, C., Roullier, N.*, Vafeados, D.K., Kalvet, I., Skotheim, R.K., Zhu, S., Motmaen, A., Herrmann, L.C., Sturmfels, P., Tischer, D., Altae-Tran, H., Juergens, D., Krishna, R., Ahern, W., Yim, J., Bera, A.K., Kang,…<\/p>\n","protected":false},"author":11,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"jetpack_post_was_ever_published":false,"footnotes":"","_links_to":"","_links_to_target":""},"tags":[],"class_list":["post-135","page","type-page","status-publish","hentry"],"acf":[],"jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/Pg42EC-2b","_links":{"self":[{"href":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/wp-json\/wp\/v2\/pages\/135","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/wp-json\/wp\/v2\/users\/11"}],"replies":[{"embeddable":true,"href":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/wp-json\/wp\/v2\/comments?post=135"}],"version-history":[{"count":8,"href":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/wp-json\/wp\/v2\/pages\/135\/revisions"}],"predecessor-version":[{"id":394,"href":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/wp-json\/wp\/v2\/pages\/135\/revisions\/394"}],"wp:attachment":[{"href":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/wp-json\/wp\/v2\/media?parent=135"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/lab.vanderbilt.edu\/mudumbi-lab\/wp-json\/wp\/v2\/tags?post=135"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}