{"id":28,"date":"2024-03-21T17:56:45","date_gmt":"2024-03-21T17:56:45","guid":{"rendered":"https:\/\/lab.prd.vanderbilt.edu\/meydan-lab\/?page_id=28"},"modified":"2026-04-20T14:54:33","modified_gmt":"2026-04-20T14:54:33","slug":"publications","status":"publish","type":"page","link":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/publications\/","title":{"rendered":"Meydan Lab Publications"},"content":{"rendered":"<h2><strong>Vanderbilt publications<\/strong><\/h2>\n<p>Roberson AB<sup>#<\/sup>, Marks J<sup>#<\/sup>, Pitts R, Tamilselvam B, Grieb B, Tansey WP, and <strong>Meydan S<\/strong>. 5-Azacytidine incorporation into mRNAs disrupts translation and induces ribosome collisions. 2026.\u00a0<em>bioRxiv : the preprint server for biology<\/em>, 2026.03.30.714548. <a href=\"https:\/\/doi.org\/10.64898\/2026.03.30.714548\">https:\/\/doi.org\/10.64898\/2026.03.30.714548<\/a> (<sup>#<\/sup>co-first authors).<\/p>\n<p>Marks J, <strong>Meydan S<\/strong>. How Tailored Ribo-Seq Methods Probe Unique Translation Events. <strong><em>RNA<\/em><\/strong>. 2026. 32:276-289. <a href=\"http:\/\/doi.org\/10.1261\/rna.080654.125\">http:\/\/doi.org\/10.1261\/rna.080654.125<\/a><\/p>\n<p>Ayres-Galhardo PH, Marks J, and <strong>Meydan S<\/strong>. Protocol for Disome-seq to identify transcriptome-wide ribosome collisions in yeast cells. <em><strong>STAR Protocols<\/strong><\/em>. 2025. <em>6<\/em>, 104047. <a href=\"https:\/\/doi.org\/10.1016\/j.xpro.2025.104047\">https:\/\/doi.org\/10.1016\/j.xpro.2025.104047<\/a><\/p>\n<h2><strong>Pre-Vanderbilt publications<\/strong><\/h2>\n<p><strong>Meydan S<sup>#<\/sup><\/strong>, Barros GC<sup>#<\/sup>, Simoes V, Harley L, Cizubu BK, Guydosh NR<sup>*<\/sup>, Silva GM<sup>*<\/sup>. The ubiquitin conjugase Rad6 mediates ribosome stalling during oxidative stress. <strong><em>Cell Reports<\/em><\/strong><em>. <\/em>2023. 42, 113359. <a href=\"https:\/\/doi.org\/10.1016\/j.celrep.2023.113359\">https:\/\/doi.org\/10.1016\/j.celrep.2023.113359<\/a> (<sup>#<\/sup>co-first authors, <sup>*<\/sup>co-corresponding authors).<\/p>\n<hr \/>\n<p><strong>Meydan S <\/strong>and Guydosh NR<strong>. <\/strong>Is there a localized role for mRNA quality control? <strong><em>RNA<\/em><\/strong><em>. <\/em>2023. <a href=\"http:\/\/doi.org\/10.1261%2Frna.079683.123\">http:\/\/doi.org\/10.1261%2Frna.079683.123<\/a><\/p>\n<hr \/>\n<p>Gasparski AN, Moissoglu K, Pallikkuth S, <strong>Meydan S<\/strong>, Guydosh NR, Mili S. mRNA Location and Translation Rate Determine Protein Targeting to Dual Destinations. <strong><em>Molecular Cell.<\/em><\/strong> 2023; 83, 1-13.\u00a0<a href=\"https:\/\/doi.org\/10.1016\/j.molcel.2023.06.036\">https:\/\/doi.org\/10.1016\/j.molcel.2023.06.036<\/a><\/p>\n<hr \/>\n<p><strong>Meydan S<\/strong>, Guydosh NR. A cellular handbook for collided ribosomes: surveillance pathways and collision types. <strong><em>Current Genetics<\/em><\/strong><em>. <\/em>2021. <a href=\"http:\/\/doi.org\/10.1007\/s00294-020-01111-w\">http:\/\/doi.org\/10.1007\/s00294-020-01111-w<\/a><\/p>\n<hr \/>\n<p><strong>Meydan S<\/strong>, Klepacki D, Vazquez-Laslop N, Mankin AS. Identification of Translation Start Sites in Bacterial Genomes. In: Labunskyy V.M. (eds) Ribosome Profiling. <strong><em>Methods in Molecular Biology, vol 2252. Springer Nature<\/em><\/strong>. 2021; 2252, 27-55. <a href=\"http:\/\/doi.org\/10.1007\/978-1-0716-1150-0_2\">http:\/\/doi.org\/10.1007\/978-1-0716-1150-0_2<\/a><\/p>\n<hr \/>\n<p>Svetlov M, Koller TO, <strong>Meydan S<\/strong>, Shankar V, Klepacki D, Polacek N, Guydosh NR, Vazquez-Laslop N, Wilson DN, Mankin AS. Context-specific action of macrolide antibiotics on the eukaryotic ribosome. <strong><em>Nature Communications.<\/em><\/strong> 2021;12, 2803. <a href=\"http:\/\/doi.org\/10.1038\/s41467-021-23068-1\">http:\/\/doi.org\/10.1038\/s41467-021-23068-1<\/a><\/p>\n<hr \/>\n<p><span style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\">Young D, <\/span><strong style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\">Meydan S<\/strong><span style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\">, Guydosh NR. 40S ribosome profiling reveals distinct roles for Tma20\/Tma22 (MCT-1\/DENR) and Tma64 (eIF2D) in 40S subunit recycling. <\/span><strong style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\"><em>Nature Communications<\/em><\/strong><em style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\">. <\/em><span style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\">2021; 12, 2976. <\/span><a style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\" href=\"http:\/\/doi.org\/10.1038\/s41467-021-23223-8\">http:\/\/doi.org\/10.1038\/s41467-021-23223-8<\/a><\/p>\n<hr \/>\n<p><strong>Meydan S<\/strong>, Guydosh NR. Disome and trisome profiling reveal genome-wide targets of ribosome quality control. <strong><em>Molecular Cell<\/em><\/strong><em>. <\/em>2020; 79, 588-602. <a href=\"http:\/\/doi.org\/10.1016\/j.molcel.2020.06.010\">http:\/\/doi.org\/10.1016\/j.molcel.2020.06.010<\/a><\/p>\n<hr \/>\n<p><strong style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\">Meydan S<\/strong><span style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\">, Marks J, Klepacki D, Sharma V, Baranov P, Firth A, Margus T, Kefi A, Vazquez-Laslop N, Mankin AS. Retapamulin-assisted ribosome profiling reveals the alternative bacterial proteome. <\/span><strong style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\"><em>Molecular Cell<\/em><\/strong><em style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\">. <\/em><span style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\">2019; 74, 481\u2013493. <\/span><a style=\"font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen-Sans, Ubuntu, Cantarell, 'Helvetica Neue', sans-serif\" href=\"http:\/\/doi.org\/10.1016\/j.molcel.2019.02.017\">http:\/\/doi.org\/10.1016\/j.molcel.2019.02.017<\/a><\/p>\n<hr \/>\n<p><strong>Meydan S, <\/strong>Vazquez-Laslop N, Mankin AS. Genes within Genes in Bacterial Genomes. <strong><em>Microbiology Spectrum<\/em><\/strong><em>. <\/em>2018; 6(4). <a href=\"http:\/\/doi.org\/doi:%2010.1128\/microbiolspec.RWR-0020-2018\">http:\/\/doi.org\/doi: 10.1128\/microbiolspec.RWR-0020-2018<\/a><\/p>\n<hr \/>\n<p><strong>Meydan S, <\/strong>Klepacki D, Karthikeyan S, Margus T, Thomas P, Jones JE, Khan Y, Briggs J, Dinman JD, Vazquez-Laslop N, Mankin AS. Programmed frameshifting generates a copper transporter and a copper chaperone from the same gene, <strong><em>Molecular Cell<\/em><\/strong>. 2017; 65(2), 207\u2013219. <a href=\"http:\/\/doi.org\/10.1016\/j.molcel.2016.12.008\">http:\/\/doi.org\/10.1016\/j.molcel.2016.12.008<\/a><\/p>\n<hr \/>\n<p>Arenz S, <strong>Meydan S<\/strong>, Starosta AL, Berninghausen O, Beckmann R, Vazquez-Laslop N, Wilson DN. Drug sensing by the ribosome induces translational arrest via active site perturbation. <strong><em>Molecular Cell<\/em><\/strong>. 2014; 56(3): 446-452. <a href=\"http:\/\/doi.org\/10.1016\/j.molcel.2014.09.014\">http:\/\/doi.org\/10.1016\/j.molcel.2014.09.014<\/a><\/p>\n<hr \/>\n<hr \/>\n<hr \/>\n<p>View all of the Meydan publications on <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=sezen+meydan\" target=\"_blank\" rel=\"noopener\">PubMed<\/a>!<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Vanderbilt publications Roberson AB#, Marks J#, Pitts R, Tamilselvam B, Grieb B, Tansey WP, and Meydan S. 5-Azacytidine incorporation into mRNAs disrupts translation and induces ribosome collisions. 2026.\u00a0bioRxiv : the preprint server for biology, 2026.03.30.714548. https:\/\/doi.org\/10.64898\/2026.03.30.714548 (#co-first authors). Marks J, Meydan S. How Tailored Ribo-Seq Methods Probe Unique Translation Events. RNA. 2026. 32:276-289. http:\/\/doi.org\/10.1261\/rna.080654.125 Ayres-Galhardo&#8230;<\/p>\n","protected":false},"author":11,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"jetpack_post_was_ever_published":false,"footnotes":"","_links_to":"","_links_to_target":""},"tags":[],"class_list":["post-28","page","type-page","status-publish","hentry"],"acf":[],"jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/PfDIdx-s","_links":{"self":[{"href":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/wp-json\/wp\/v2\/pages\/28","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/wp-json\/wp\/v2\/users\/11"}],"replies":[{"embeddable":true,"href":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/wp-json\/wp\/v2\/comments?post=28"}],"version-history":[{"count":23,"href":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/wp-json\/wp\/v2\/pages\/28\/revisions"}],"predecessor-version":[{"id":365,"href":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/wp-json\/wp\/v2\/pages\/28\/revisions\/365"}],"wp:attachment":[{"href":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/wp-json\/wp\/v2\/media?parent=28"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/lab.vanderbilt.edu\/meydan-lab\/wp-json\/wp\/v2\/tags?post=28"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}